Hello everybody,

does anyone know, where I can find the correct values for the qcdf file of
the droso[hila genome 2 microarrays?

I am running the qc plot analysis using qc() from smpleaffy/affy packages.

As I needed to set manually the environment I just took the human qcdf file
from the R repository and used it to run my qc(raw.data)

> setQCEnvironment(array="drosophila2cdf", path="~/Luke/Microarray") # set
environemnt for the right array cdf
> qc = qc(raw.data, eset.mas5)
> plot(qc)

Unfortunately the values are not correct ( at least I hope they're not). Is
there somewhere I can find the correct values for these genes?

Does Affymetrix has a repository of qcdf files? I looked everywhere in
Netaffx, but couldn'r find anything?

A few months ago, I found an unrelated repository, where someone uploaded
some qcdf files, but now I can't find it anymore.

Does someone has an idea as to where I can find something like that?

Thanks for the help

Assa

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