You are asking about Affy Exon Expression array or after RNA-seq?
 
Vasu

--- On Thu, 3/31/11, adeonari@mrc-lmb.cam.ac.uk <adeonari@mrc-lmb.cam.ac.uk> wrote:


From: adeonari@mrc-lmb.cam.ac.uk <adeonari@mrc-lmb.cam.ac.uk>
Subject: [BioC] Using DESeq or EdgeR for Exon Differential Expression Analysis
To: "'bioconductor@r-project.org'" <bioconductor@r-project.org>
Date: Thursday, March 31, 2011, 1:18 PM


Hello Bioconductor community,

We were wondering if it would be possible to perform differential
expression analysis of exon expression using DESeq or EdgeR. Would the
statistical assumptions be the same, and has anyone attempted this type of
analysis? Any feedback or insights would be really appreciated!

Cheers,

Andrew

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