I reinstalled  R and then all the packages necessary for running
oneChannelGUI throught  biocLite.
The only think that I would guess is that the last week I've updated my
ubuntu from 10.04 to 10.10




2011/3/28 Steve Lianoglou <mailinglist.honeypot@gmail.com>

> Hi,
>
> On Mon, Mar 28, 2011 at 9:35 AM, Martin Morgan <mtmorgan@fhcrc.org> wrote:
> > On 03/28/2011 06:24 AM, Guido Leoni wrote:
> >>
> >> I've an update about my problem:
> >> running  in oneChannelGUI an analysis on a set of 3' arrays and
> requesting
> >> a
> >> gcrma normalization with apt: everything ends fine ....
> >> Need I to reinstall R ?
> >
> > The error suggests a mismatch between the compiled code in a package and
> the
> > support libraries available on your computer. The most likely cause is
> that
> > the package was compiled ('installed') against a different set of
> libraries
> > than are currently available. Likely you copied libraries from one
> location
> > to another. You can try to correct this problem one package at a time,
> but
> > this is tedious and error-prone.
> >
> > Of course if this is right before a deadline then you will want to
> proceed
> > with care, so as not to end up with a system that is completely unusable.
> It
> > might also be worth while to wait a little; perhaps I have mis-diagnosed
> the
> > problem and someone else will provide a more accurate solution.
>
> I guess a more direct question to help smoke out the problem that
> Martin is thinking of, is:
>
> How did you "reinstall the old packages" after your update?
>
> Did you do it through biocLite, or did you just copy the packages in
> your older library folder to the new install?
>
> -steve
>
> --
> Steve Lianoglou
> Graduate Student: Computational Systems Biology
>  | Memorial Sloan-Kettering Cancer Center
>  | Weill Medical College of Cornell University
> Contact Info: http://cbio.mskcc.org/~lianos/contact
>



-- 
Guido Leoni
National Research Institute on Food and Nutrition
(I.N.R.A.N.)
via Ardeatina 546
00178 Rome
Italy

tel     + 39 06 51 49 41 (operator)
        + 39 06 51 49 4498 (direct)

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