Dear all,
i am a beginner.
This is my first post and i hope it is clear.
I'm developing a pipeline to analyze DNA reads from NGS machines.
Now, after the alignemnt and the study of the SAM file,  i have a file.vcf
and a file.snp about the structural variations of the DNA code.
Now i want to manage those files (SAM/BAM, snp and vcf) with Bioconductor
packages for a statistical  analysis of my variations.
It's possible with R?
If yes, what do you suggest?
Thanks a lot.
Regards,
         V

	[[alternative HTML version deleted]]

