Hello,
I want to analyze DGE for three different groups (for eg., gpA, B and C). I
know that this will analyze only two groups at a time, which is fine for my
analysis. But, I have the counts for all the groups in one txt  file. When I
run exact test, it will analyze for gp A- gp B. My question is if I want to
run the analysis for gpA and gp C what command do I need to use.

Alternatively, if I load the data for two gps at time, will the p.value
change as against to when all the groups are loaded into R.

Any help or suggestions will be appreciated.

Thanks,
Sridhara



-- 
Sridhara G Kunjeti
PhD Candidate
University of Delaware
Department of Plant and Soil Science
email- sridhara@udel.edu
Ph: 832-566-0011

	[[alternative HTML version deleted]]

