And we can add those to the GEOmetadb mappings if we have an up-to-date
list.  This goes for other bioconductor annotation packages, as well; just
send the data.  We stopped trying to keep up, but if given the info, it is
straightforward to add those mappings.  The GEOmetadb information is updated
approximately weekly at this point, I believe.

Sean

On Thu, Feb 3, 2011 at 11:26 AM, Pan Du <dupan@northwestern.edu> wrote:

> Hi Denise
>
> Thanks for your suggestion. I agree it will be help to include GEO GPL IDs
> for different Illumina chips in the IlluminaIDMapping annotation package.
> If
> you have the mapping available, could you send me the list? So I don't need
> to search again. I will add an additional table for this in the IDMapping
> packages together with a retrieve function in the lumi package in the next
> Bioc release.
> Thanks!
>
>
> Pan
>
>
> On 2/2/11 4:10 PM, "Denise Mauldin" <dmauldin@systemsbiology.org> wrote:
>
> > Hello,
> >
> > I've been using the lumiHuman/Mouse/RatIDMapping packages from
> Bioconductor
> > for awhile now.  Thanks very much for creating them.  I was wondering if
> it
> > would be possible to either add a list of GEO GPL IDs to the package
> somehow
> > or if you could send me a corresponding list.  By searching through the
> GEO
> > GPL records, I think I've figured out that HumanRef8_V3_0_R0_11282963_A
> is
> > GPL6883 and I could do this for the remainder of the packages, but I was
> > hoping that you may have a list available.
> >
> > Thanks,
> > Denise
>
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