On Fri, Jan 7, 2011 at 3:12 PM, Radhouane Aniba <aradwen@gmail.com> wrote:

> Hi BioC,
>
> A lot of yeast cross species expression data analysis exist in litterature
> today, is it a common procedure to process litterature for newly expressed
> species, let's stay in fungi for example.
>
> Is it possible to do an automated scan through databases using Bioconductor
> ? if yes which package allow to do that.
>
>
Hi, Radhouane.  Are you looking for public gene expression data?  If so,
refer to the NCBI GEO and EBI ArrayExpress databases.  There are tools to
examine metadata from NCBI GEO (the GEOmetadb package) and to access data
from GEO (GEOquery) and ArrayExpress (ArrayExpress).  If you meant something
else, perhaps you can clarify what you are asking.

Sean



> Regards
>
> Rad
>
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>
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