Hi

 

I'm trying to ues retrieveKGML from KEGGgraph package:

  retrieveKGML(pathwayid="05211", organism="hsa", destfile=tmp)

Warning message:

In download.file(kgml, destfile = destfile, method = method, ...) :

  download had nonzero exit status

  colFile <- system.file("extdata/hsa05211.xml",package="KEGGgraph")

  g <- parseKGML2Graph(colFile)

Error:   does not seem to be XML, nor to identify a file name

 

as you can see I got warning message, is it ok? I don't think it worked
properly, since I got error after I ran parse KGML2Graph, 

I guess i need to install wget, but can't find wget for win 64. 

 

 

any suggestion?

 

many thanks

 

yan


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