hi, 
when I use the function "HumMeth27QCReport" on the demodata included in the 
package HumMeth27QCReport, I get the message.
 

Erreur dans data.frame(Index = samps2$Index, `Sample ID` = samps2$SampleID,  : 
  arguments imply differing number of rows: 12, 0
De plus : Message d'avis :
In normalizeMethyLumiSet(mldat[, toKeep]) :
  This function is probably not optimal for Infinium data and is meant
for GoldenGate methylation data only.

But in my folder , this function generate the interest graphs for QC. 
Have this message some consequencies on the interpretation or the result of QC ?

Greg
Montreal  

> sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: x86_64-pc-mingw32/x64 (64-bit)

locale:
[1] LC_COLLATE=French_Canada.1252  LC_CTYPE=French_Canada.1252   
[3] LC_MONETARY=French_Canada.1252 LC_NUMERIC=C                  
[5] LC_TIME=French_Canada.1252    

attached base packages:
 [1] tcltk     grid      splines   stats     graphics  grDevices utils    
 [8] datasets  methods   base     

other attached packages:
 [1] HumMeth27QCReport_1.0 WriteXLS_2.1.0        plotrix_3.0-2        
 [4] gplots_2.8.0          caTools_1.10          bitops_1.0-4.1       
 [7] gdata_2.8.0           gtools_2.6.2          Hmisc_3.8-3          
[10] survival_2.35-8       methylumi_1.6.1       amap_0.8-5           
[13] Biobase_2.10.0       

loaded via a namespace (and not attached):
[1] cluster_1.13.1  lattice_0.19-13 tools_2.12.0



      
	[[alternative HTML version deleted]]

