Hello Anna,
I copy pasted the exact commands and installed limma on my ubuntu box. Can
you please post the output for

sessionInfo()

Thanks,
S.

sessionInfo()
--
Platform: i486-pc-linux-gnu (32-bit)

locale:
 [1] LC_CTYPE=en_US.utf8       LC_NUMERIC=C
 [3] LC_TIME=en_US.utf8        LC_COLLATE=en_US.utf8
 [5] LC_MONETARY=C             LC_MESSAGES=en_US.utf8
 [7] LC_PAPER=en_US.utf8       LC_NAME=C
 [9] LC_ADDRESS=C              LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.utf8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     grDevices utils     datasets  graphics  methods   base

other attached packages:
[1] limma_3.6.6     lattice_0.19-13

loaded via a namespace (and not attached):
[1] grid_2.12.0  tools_2.12.0



On Mon, Nov 1, 2010 at 6:42 PM, <khasanova@berkeley.edu> wrote:

> Hi,
>
> I'm having trouble installing limma. I have R version 2.10. This is the
> error message I keep getting:
>
> > source("http://bioconductor.org/biocLite.R")
> Warning messages:
> 1: In safeSource() : Redefining ‘biocinstall’
> 2: In safeSource() : Redefining ‘biocinstallPkgGroups’
> 3: In safeSource() : Redefining ‘biocinstallRepos’
> > biocLite('limma')
> Error in v[, i] : incorrect number of dimensions
> >
>
> How can I fix this?
> Thank you,
> Anna
>
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