Hey,

I've been using beedarray quite often, but now with the new version I'm running in some error when trying to reading in the bead level data with readIllumina(). Does anyone know why this is happening or had a similar experience? What is meant with file 'NA/NA'?

Thanks for any help!
Karl

see below:

> bld=readIllumina(arrayNames=targets$Array, textType=".txt", backgroundMethod="none", annoPkg="Humanv4", useImages=FALSE)
Fehler in file(file, "rt") : kann Verbindung nicht öffnen //error: can't open connection
Zusätzlich: Warnmeldung: //additional: error
In file(file, "rt") :
  kann Datei 'NA/NA' nicht öffnen: No such file or directory // can't open file 'NA/NA'
> bld=readIllumina(useImages = FALSE, illuminaAnnotation = "Humanv4")
Fehler in file(file, "rt") : kann Verbindung nicht öffnen //error: can't open connection
Zusätzlich: Warnmeldung:
In file(file, "rt") ://additional: error
  kann Datei 'NA/NA' nicht öffnen: No such file or directory // can't open file 'NA/NA'
> sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: i386-pc-mingw32/i386 (32-bit)

locale:
[1] LC_COLLATE=German_Germany.1252  LC_CTYPE=German_Germany.1252    LC_MONETARY=German_Germany.1252
[4] LC_NUMERIC=C                    LC_TIME=German_Germany.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] illuminaHumanv4BeadID.db_1.8.0 org.Hs.eg.db_2.4.6             RSQLite_0.9-2                 
[4] DBI_0.2-5                      AnnotationDbi_1.12.0           limma_3.6.6                   
[7] beadarray_2.0.1                Biobase_2.10.0                

loaded via a namespace (and not attached):
[1] tools_2.12.0


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