Thank's!

Noemi




________________________________
Von: James W. MacDonald <jmacdon@med.umich.edu>
An: Noemi Andor <Noemi.Andor@campus.lmu.de>
CC: bioconductor@stat.math.ethz.ch
Gesendet: Dienstag, den 26. Oktober 2010, 6:10:14 Uhr
Betreff: Re: [BioC] gene-locations

Hi Noemi,

On 10/26/2010 3:21 AM, Noemi Andor wrote:
> Hello,
>
> I have a question regarding the mapping of genes to their chromosomal
> locations. I'm using the expression data from affymetrix with probes
> attributed to the Hthgu133ahsrefseq - CDF files
>(http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/13.0.0/refseq.asp).
>.
> On the other hand I'm using CNV-data from agilent (Agilent Human
> Genome CGH Microarray Kit 244K). I would like to assess the impact of
> CNV on expression - how could I find out on which genome assembly the
> mappings are based  (hg 17/18/19), i.e. if they are compatible?

http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/13.0.0/version.html


Best,

Jim


>
> thank's
>
> Noemi
>
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-- 
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
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