Dear list,

I have annotation question and just hope that someone had already similar problem and
would be willing to share the experience.

I have about 100 mouse SNPs in the format:

Chromosome number     SNP coordinate
(for example:)
16                                 69067865

I need to annotate them, in order to understand whether they are functional or not.
I can go one-by-one through UCSC (http://www.genome.ucsc.edu/)
and annotate them, but I hope that may be someone already did something similar
and has better ideas about how to do it faster, probably using Bioconductor?
And also, may be there are specific resources available for mouse SNPs annotation?
There is mouse HapMap, but it is just a collection of SNPs in different strains and nothing else.

I would really appreciate your suggestions!
best regards
Galina

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