Hi, Nikhil.

You'll probably want to follow the posting guide and post a reproducible
example and the output of sessionInfo() in order to get good help.  That
way, we don't have to guess too much and give you incorrect advice.

Sean


On Wed, Sep 8, 2010 at 8:21 AM, BTIS Department <btis@actrec.gov.in> wrote:

> Dear Group members,
>
>         I am using 'aCGH' package. In this I would like to run "find
> genomic events" with each of the array CGH samples. I am getting following
> error
>
> /**Output/**
>
>  genomic.events(ex.acgh) <- find.genomic.events(ex.acgh)
>>
> Finding outliers
> Finding focal low level aberrations
> Finding transitions
> Finding focal amplifications
> Processing chromosome  1
> Error: (subscript) logical subscript too long
> In addition: Warning messages:
> 1: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
> 2: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
> 3: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
> 4: In max(indstretch[indstretch < indaber[m]]) :
>  no non-missing arguments to max; returning -Inf
> 5: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
> 6: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
> 7: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
> 8: In min(indstretch[indstretch > indaber[m]]) :
>  no non-missing arguments to min; returning Inf
>
>        I am not able to understand how the error "(subscript) logical
> subscript too long" can be removed.
>        Help on this problem will be highly appreciated.
>
> Thanks,
>
> Nikhil Gadewal
>
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