On Wed, Sep 1, 2010 at 2:22 AM, Alanne, Mervi <Mervi.Alanne@wri.fi> wrote:

>  Dear All,
>
> I updated my annotation library lumiHumanAll.db into version 1.10.1 but I'm
> unable to load it correctly. The error message is below.
>
> The latest version is created with R-version 2.11.1 and I'm working with R
> 2.10. Could this be the reason? Unfortunately I can't update R quickly
> without administrative rights. Another error is the DBSCHEMA. I dont' know
> which of the packages I'm using has updated dbconn. Is there any way I could
> downgrade both dbconn and lumiHumanAll?? Can the old versions be found
> somewhere??
>
> Loading required package: org.Hs.eg.db
> Error in checkDBSCHEMA(dbconn, "HUMANCHIP_DB") :
>  invalid DB schema version (found 2.1, expected 2.0)
> In addition: Warning message:
> package 'lumiHumanAll.db' was built under R version 2.11.1
> Error : .onLoad failed in 'loadNamespace' for 'lumiHumanAll.db'
> Error: package/namespace load failed for 'lumiHumanAll.db'
>
>
Hi, Mervi.  You should be installing everything using biocLite().  This will
keep problems like this from happening in the first place.  I would remove
the lumiHumanAll.db package and then use biocLite() to reinstall.  Also, for
future reference, be sure to follow the posting guide and include the output
of sessionInfo() when emailing the list.

Sean

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