* Hi All, ** ** I am new to the world of R and Bioconductor and I had
the** following error when I try to read a fastaq file of 2 Gb****
First I try to run it in Linux, but there i had an error that tell me
*

* <**

Error: (dirPath, pattern, ...) cannot open file

*

* Then i try to run it in Windows and there i had this error*

*
*

*
*

* > library(ShortRead)*

*** > plantula <- readFastq("s6_plantula.fq", qualityType="SFastqQuality")*

*** Error: cannot allocate vector of size 649.8 Mb*

*
*

* *

* Then i **set memory.size() at 3000 as well as memory.limit() but i'm
already having the problem*

* i has a processor of 32 bits, a virtual memory of 3754 Mb*

*  ** Can someone tell me if this is due to an improper configuration,
lack** of sufficient memory, etc?*


-- 
Marco Ortiz
*Undergraduate Program in Genomic Sciences*.
*National Autonomous University* of *Mexico*

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