Dear All,
I'm a beginner and learning R for microarray analysis.I'm using
aroma.affymetrix.
There is a problem when I installed the EBImage package.
The installation is fine.
*************************************
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
* DONE (EBImage)
**********************************
But when I typed library(EBImage),then there are some information below.
****************************************
Loading required package: abind

 *** caught segfault ***
address 0x2, cause 'memory not mapped'

Traceback:
 1: dyn.load(file, DLLpath = DLLpath, ...)
 2: library.dynam(lib, package, package.lib)
 3: loadNamespace(package, c(which.lib.loc, lib.loc), keep.source =
keep.source)
 4: doTryCatch(return(expr), name, parentenv, handler)
 5: tryCatchOne(expr, names, parentenv, handlers[[1L]])
 6: tryCatchList(expr, classes, parentenv, handlers)
 7: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if
(!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))
        call <- sys.call(-4L)        dcall <- deparse(call)[1L]
 prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <-
conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L +
nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if (is.na(w))
          w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
  type = "b")        if (w > LONG)             prefix <- paste(prefix, "\n
 ", sep = "")    }    else prefix <- "Error : "    msg <- paste(prefix,
conditionMessage(e), "\n", sep = "")    .Internal(seterrmessage(msg[1L]))
 if (!silent && identical(getOption("show.error.messages"),         TRUE)) {
       cat(msg, file = stderr())        .Internal(printDeferredWarnings())
 }    invisible(structure(msg, class = "try-error"))})
 8: try({    ns <- loadNamespace(package, c(which.lib.loc, lib.loc),
keep.source = keep.source)    dataPath <- file.path(which.lib.loc, package,
"data")    env <- attachNamespace(ns, pos = pos, dataPath = dataPath)})
 9: library("EBImage")

Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Selection:
*******************************************
By the way details are R2.10;  gtk+-2.20.0;  pkg-config-0.22;
 ImageMagick-6.6.3-7 and EBImage 3.4.0
My system is Ubuntu10.04.
I searched it through google,somebody said for Ubuntu ,the GTK doesn't work
well with ImageMagick.But the bug was in gcc4-2,and now it's changed.
I think there might be something wrong about the GTK2.0 but I can't find
out,Could anybody help me with this problem?Thanks a lot!
-- 
Xiu

Institute for Molecular Endocrinology
LFI13,Kerpener Str. 62
University Clinic ,50924 Cologne,Germany
Tel    +49 221 478 97794 (lab)
E-mail:xiushanyin@gmail.com <E-mail%3Axiushanyin@gmail.com>

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