Hi Guys,


I am trying to run scaling normalization in egder package using
calcNormFactors.
Btw, this function returns only a scaling factor values for each sample.
so, a quick question: after i obtain such scaling factors from the function,
i need to simply and manually compute as like below further?

norm_data <- data_mat * scaling factors / library size


this procedure is the very scaling normalization proposed by Robinson.


is that correct? if there is anyone who knows that, plz throw an reply.
Thanks --S

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