Hello,

I constructed a methyLumiSet for my data, and then tried to apply the normalization upon it:
 normalizeMethyLumiSet(eset)


But I get an error:


Fehler in if (newcy5l < cy3l) { : Fehlender Wert, wo TRUE/FALSE nötig ist

(translation: error in if (newcy5l < cy3l) { : missing value, where TRUE/FALSE is necessary) 

Would be greatefull for a hint on what the cause of this message could be. Is it may be because I have no cy5, cy3 labelings within my data (instead I have methylated, unmethylated -labels)

below the session-info.

best,

Noemi

R version 2.10.0 (2009-10-26) 
i386-pc-mingw32 

locale:
[1] LC_COLLATE=German_Germany.1252  LC_CTYPE=German_Germany.1252   
[3] LC_MONETARY=German_Germany.1252 LC_NUMERIC=C                   
[5] LC_TIME=German_Germany.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] limma_3.2.3     methylumi_1.0.0 Biobase_2.6.1  

loaded via a namespace (and not attached):
[1] grid_2.10.0     lattice_0.17-26 tools_2.10.0   


	[[alternative HTML version deleted]]

