Dear List
I've computed the overrapresentation of GO terms in a list of up/down
regulated genes retrieved from LIMMA analysis of MA experiments.
Now I'm trying to clustering the GO term that I've found by semantic
similarity  with the mclustersim function. This is the first time that I use
this function and the input that I pass to the function is the list of
modulated genes associated to overappresentated  GO terms.
Do you think that this function is suitable for my purpose? If no could you
suggest to me an alternative approach to clusterize my GO term according to
their similarity?
thank you very much

-- 
Guido Leoni
National Research Institute on Food and Nutrition
(I.N.R.A.N.)
via Ardeatina 546
00178 Rome
Italy

tel     + 39 06 51 49 41 (operator)
       + 39 06 51 49 4519 (direct)

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