
Dear list,

I am trying the following and I am getting an error. Could you help me please?

Thanks!
Dave

> vsnrmadata
ExpressionSet (storageMode: lockedEnvironment)
assayData: 34760 features, 12 samples 
  element names: exprs 
protocolData
  sampleNames: 01_V12_1.CEL, 02_V12_2.CEL, ..., 12_D12_3.CEL  (12 total)
  varLabels and varMetadata description:
    ScanDate: NA
phenoData
  sampleNames: 01_V12_1.CEL, 02_V12_2.CEL, ..., 12_D12_3.CEL  (12 total)
  varLabels and varMetadata description:
    Treatment: 
featureData: none
experimentData: use 'experimentData(object)'
Annotation: mogene10stv1

> fvsnrmadata = nsFilter(vsnrmadata, require.entrez = TRUE, require.GOBP = FALSE, require.GOCC = FALSE, require.GOMF = FALSE, var.filter = FALSE)$eset
Error: getAnnMap: package mogene10stv1 not available

> sessionInfo()
R version 2.11.0 (2010-04-22) 
i386-pc-mingw32 

locale:
[1] LC_COLLATE=English_United Kingdom.1252  LC_CTYPE=English_United Kingdom.1252    LC_MONETARY=English_United Kingdom.1252 LC_NUMERIC=C                           
[5] LC_TIME=English_United Kingdom.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] limma_3.4.0                 mogene10stprobeset.db_5.0.1 org.Mm.eg.db_2.4.1          RSQLite_0.8-4               DBI_0.2-5                   AnnotationDbi_1.10.0       
 [7] genefilter_1.30.0           vsn_3.16.0                  mogene10stv1cdf_2.6.0       affy_1.26.0                 Biobase_2.8.0              

loaded via a namespace (and not attached):
[1] affyio_1.16.0         annotate_1.26.0       grid_2.11.0           lattice_0.18-5        preprocessCore_1.10.0 splines_2.11.0        survival_2.35-8       tools_2.11.0         
[9] xtable_1.5-6

 		 	   		  
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