Sure. Maybe it's something that is clear to a biologist and I (as a physicist) cannot read in-between the lines.
I redirected my question to a biologist at the Temple University whom we collaborate with. ... In fact I proposed to leave those
miRNAs out of the validation table we are building. He disapproved. 
If he does not come up with the sequence then I will try to contact the paper authors.

Maura

-----Messaggio originale-----
Da: seandavi@gmail.com per conto di Sean Davis
Inviato: mar 18/05/2010 17.21
A: mauede@alice.it
Cc: Heidi Dvinge; Bioconductor List
Oggetto: Re: [BioC] R: Redirection of Silencing Targets by Adenosine-to-Inosine Editing of miRNAs
 
On Tue, May 18, 2010 at 11:04 AM, <mauede@alice.it> wrote:

> I read the paper by Kawahara et al, 2007 in advance of posting my question.
> It seems to me (I am not a biologist)  that the articlle explains the
> discovery and
>  implications of edited miRNAs ... There is also a nice picture. But I
> cannot read out any
> sequence.
>
>
Hi, Maura.  You could write to the author of that reference if the paper is
unclear.

Sean



> -----Messaggio originale-----
> Da: Heidi Dvinge [mailto:heidi@ebi.ac.uk]
> Inviato: mar 18/05/2010 15.47
> A: mauede@alice.it
> Cc: Bioconductor  List
> Oggetto: Re: [BioC] Redirection of Silencing Targets by
> Adenosine-to-Inosine Editing of miRNAs
>
> Dear Maura,
>
> your best bet here is probably the article that the data in TarBase
> was taken from. There's a reference for each entry; you can check
> those manually.
>
> Best
> \Heidi
>
> On 18 May 2010, at 14:38, <mauede@alice.it> <mauede@alice.it> wrote:
>
> > TarBase contains some miRNAs that have undergone the biological
> > editing process.
> > No sequence, though, is available for such "transformed" miRNAs.
> > I wonder whether the sequences for such miRNAs are stored in some
> > database.
> >
> > Thank you in advance for any suggestion.
> > Maura
> >
> >
> > tutti i telefonini TIM!
> >
> >
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>
>
> tutti i telefonini TIM!
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>
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tutti i telefonini TIM!


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