Dear Farmer,

you can use GOstats package.
regards,
Andreia

On Mon, Apr 19, 2010 at 10:59 AM, Rohit Farmer <rohit.farmer@gmail.com>wrote:

> Hello everyone ...
>
> I just did a moderate t statistics using limma package and found out a
> list of genes which are differentially expressed now i wan to go for
> gene set enrichment analysis using GO terms and pathway analysis ...
> so can anyone suggest me the bioconductor packages which i can use for
> the same ..
>
> Thanks and regards
>
> Rohit
> --
> Rohit Farmer
> M.Tech Bioinformatics
> Department of Computational Biology and Bioinformatics
> Jacob School of Biengineering and Biotechnology
> Sam Higginbottom Institute of Agriculture, Technology and Sciences
> (Formerly known as Allahabad Agricultural Institute - Deemed University)
> Allahabad, UP, INDIA - 211 007
> Ph. No. 9839845093, 9415261403
> e-Mail rohit.farmer@gmail.com
> Blog http://rohitsspace.blogspot.com
>
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>



-- 
--------------------------------------------
Andreia J. Amaral
Unidade de Imunologia Clínica
Instituto de Medicina Molecular
Universidade de Lisboa
email: andreiaamaral@fm.ul.pt
         andreia.fonseca@gmail.com

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