Hi,

In Limma I run topTable for Affy chips. After write.table(), there are 8
columns of data, but only 7 headers (and they are misplaced to the left by 1
position). The last column "B" is log odd, correct? What is the data in the
first column?

Also, the topTable help says "toptable is an earlier interface and is
retained only for backward compatibility." So is it deprecated? What is the
new interface?

Timothy

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