Is there a standard workflow to produce RMA/PLM chip pseudo images,
NUSE, RLE plots and the like for HuGene 1.0 ST arrays in xps?  I think
creating an AffyBatch object may be the way to go, but I'd like to
confirm this first before figuring out how to create one.  Will this run
into memory issues?

 

Regards,

 

_Taku

 

Taku A. Tokuyasu, PhD

Computational Biologist

Biostatistics and Computational Biology Core

UCSF, Box 0128

Helen Diller Family Cancer Research Building

1450 3rd Street, HD555

San Francisco, CA 94158-9001

Tel: (415) 514-1530

Fax: (415) 502-3179

Email: tokuyasu@cc.ucsf.edu

 


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