Hi,

I wanted to query on the NCBI36 build, and built the following query:
----------------------------------------
entrezIDs <- c("8334","85236","10857","8349","5055") # sample list of ids
  ensembl <- useMart(biomart="ensembl", dataset="hsapiens_gene_ensembl",archive=TRUE) #"ensembl_mart_49"            
  locations <- getBM(c('entrezgene','hgnc_symbol','chromosome_name',
                 'start_position','end_position'), filters="entrezgene",
       values=entrezIDs, mart=ensembl)
_________________________________


I get the following error:
Error in listFilters(mart, what = "type") : 
  The function argument 'what' contains an invalid value: type
Valid are: name, description, options, fullDescription, filters5, filters6


How should I modify the query? If I use the query with the current/default version of ensembl, the query executes ok.
thanks!
My sessionInfo() is:
-----------------
R version 2.9.1 (2009-06-26) 
i386-pc-mingw32 

locale:
LC_COLLATE=English_United States.1252;LC_CTYPE=English_United States.1252;LC_MONETARY=English_United States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods 
[8] base     

other attached packages:
 [1] e1071_1.5-19        class_7.2-47        org.Hs.eg.db_2.2.11
 [4] GOstats_2.10.0      graph_1.22.2        Category_2.10.1    
 [7] GO.db_2.2.11        biomaRt_2.0.0       multtest_2.1.1     
[10] XML_2.5-3           genefilter_1.24.2   hgu133a.db_2.2.12  
[13] RSQLite_0.7-1       DBI_0.2-4           AnnotationDbi_1.6.1
[16] GEOquery_2.8.0      RCurl_0.98-1        affy_1.22.0        
[19] Biobase_2.4.1       gplots_2.7.1        caTools_1.9        
[22] bitops_1.0-4.1      gdata_2.6.1         gtools_2.6.1      
[25] lattice_0.17-25    

loaded via a namespace (and not attached):
 [1] affyio_1.12.0        annotate_1.22.0      GSEABase_1.6.1      
 [4] MASS_7.2-47          preprocessCore_1.6.0 RBGL_1.20.0         
 [7] splines_2.9.1        survival_2.35-4      tools_2.9.1         
[10] xtable_1.5-5        
> 


      
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