On Thu, Aug 20, 2009 at 8:15 PM, Kai Treuner <ktreuner@braincellsinc.com>wrote:

> Hi,
> I am trying to get the gene symbols and names of genes included in the
> TopTable. I am using affylmGUI package under R 2.9.1 on windows XP. Even
> after downloading the hgu133plus2.db annotation file as well as the
> annotate, annaffy and other packages it doesn't work.
>
> These are the error messages:
> Error in text(A[topGenes],M[topGenes], labels= substr(genelist[topGenes,
> : object 'topGenes' not found
>
> Warning messages:
> 1: In getDependencies(pkgs, dependencies, available, lib) :
>  package 'hgu133plus2' is not available
> 2: In getDependencies(pkgs, dependencies, available, lib) :
>  package 'hgu133plus2' is not available
>

Hi, Kai.

You'll want to give the code that you are using for your analysis as well as
the output of sessionInfo().

Sean

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