On Wed, Aug 5, 2009 at 4:16 AM, Mayra Eduardoff
<mayra.eduardoff@gmail.com>wrote:

> Ok, this might be really obvious, but I finally managed.
> I am using R on Windows at the moment, so I had to download the Rtools from
> http://www.murdoch-sutherland.com/Rtools/Rtools.txt so that i can compile
> and install tar.gz packages.
> then I compiled the .db and installed it using R CMD INSTALL.


Good to hear that it worked for you.


>
> I still don t know how to compile windows binaries... but well it works
> this way.


R CMD build ...


>
> thanks again for your help !
> kind regards
> mayra
>
>
> On Tue, Aug 4, 2009 at 6:59 PM, Sean Davis <seandavi@gmail.com> wrote:
>
>>
>>
>> On Tue, Aug 4, 2009 at 12:55 PM, Mayra Eduardoff <
>> mayra.eduardoff@gmail.com> wrote:
>>
>>> I ve read the help and tried before and it is not working...
>>>
>>> the db is in my working directoy
>>>
>>> install.packages("zfv2.db", pkgs="zfv2.db",repos=NULL)
>>>
>>
>> install.packages(pkgs="zfv2.db.tar.gz",repos=NULL)
>>
>> You will need to tar and compress the package directory, I think.
>>
>> Sean
>>
>>
>>
>>>
>>> get a german error message, so I guess that won't help
>>>
>>> Fehler in if (ok) { : Fehlender Wert, wo TRUE/FALSE nötig ist
>>>
>>>
>>>
>>>
>>> On Tue, Aug 4, 2009 at 6:44 PM, Sean Davis <seandavi@gmail.com> wrote:
>>>
>>>>
>>>>
>>>> On Tue, Aug 4, 2009 at 12:34 PM, Mayra Eduardoff <
>>>> mayra.eduardoff@gmail.com> wrote:
>>>>
>>>>> thanks for the quick answer, yes, but how do I install it ?
>>>>> install.package ? but what is my repos ? I don t have a binary file or
>>>>> do I ?  I just don t get it ....
>>>>>
>>>>
>>>> doing ?install.packages will get you help for install.packages().
>>>>
>>>> However, install.packages() with repos=NULL and the file path of the
>>>> package should do it.  It is probably not a binary package.
>>>>
>>>> Sean
>>>>
>>>>
>>>>
>>>>>
>>>>>
>>>>>
>>>>> On Tue, Aug 4, 2009 at 6:17 PM, Sean Davis <seandavi@gmail.com> wrote:
>>>>>
>>>>>>
>>>>>>
>>>>>> On Tue, Aug 4, 2009 at 12:11 PM, Mayra Eduardoff <
>>>>>> mayra.eduardoff@gmail.com> wrote:
>>>>>>
>>>>>>> Dear all,
>>>>>>> this might be a really, really stupid question, but I can't figure it
>>>>>>> out.
>>>>>>> I have created an annotation.db for an agilent one color 4x44K
>>>>>>> zebrafish
>>>>>>> array, but I can't figure out how to load it into R afterwards. Can
>>>>>>> anyone
>>>>>>> help ?
>>>>>>>
>>>>>>
>>>>>> You need to "install" it, first.  Then, you can load it.
>>>>>>
>>>>>> Sean
>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Mayra Eduardoff
>>>>> Institute of Molecular Biology
>>>>> University of Innsbruck
>>>>> Viktor-Franz Hess Haus
>>>>> Technikerstrasse 25
>>>>> 6020 Innsbruck
>>>>> Tel: +43 512 507 6286
>>>>> email: mayra.eduardoff@student.uibk.ac.at
>>>>>
>>>>>
>>>>
>>>
>>>
>>> --
>>> Mayra Eduardoff
>>> Institute of Molecular Biology
>>> University of Innsbruck
>>> Viktor-Franz Hess Haus
>>> Technikerstrasse 25
>>> 6020 Innsbruck
>>> Tel: +43 512 507 6286
>>> email: mayra.eduardoff@student.uibk.ac.at
>>>
>>>
>>
>
>
> --
> Mayra Eduardoff
> Institute of Molecular Biology
> University of Innsbruck
> Viktor-Franz Hess Haus
> Technikerstrasse 25
> 6020 Innsbruck
> Tel: +43 512 507 6286
> email: mayra.eduardoff@student.uibk.ac.at
>
>

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