Dear Peng,

check the Affy-Homepage, I think that's what you are looking for:

http://www.affymetrix.com/support/technical/whitepapers.affx

You'll find several technical manuals on this page, or alternatively on the
"manuals"-page... Check for example Statistical Algorithms Description
Document (pdf, 216
KB)<http://www.affymetrix.com/support/technical/whitepapers/sadd_whitepaper.pdf>for
an algorithm description.

Please note that for some manuals you have to log-in, however, setting up an
account is for free.

Cheers, Sam


2009/8/4 Peng Yu <pengyu.ut@gmail.com>

> Hi,
>
> The following pdf file mentioned the A ymetrix MAS manual (the first
> and the second reference). But I don't find these manuals online. Can
> somebody let me know how I can find it?
>
>
> http://www.bioconductor.org/packages/release/bioc/vignettes/affy/inst/doc/affy.pdf
>
> Regards,
> Peng
>
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