Hi,

I had successfully analyzed Nimblegen microarray data with oligo package,
according to the document,
http://www.bioconductor.org/packages/2.4/bioc/vignettes/oligo/inst/doc/oligoNimblegenExpression.pdf
.
However, I was not able to get normalized data for each probe since the
'rma' funcation returned expression data for each gene summarized via median
polish.
How can I get the normalized data for each probe before summarizing?

Thanks for any help,

Tae-Ho Lee

-- 
Tae-Ho Lee
Research scientist
GreenGene Biotech Inc.
Namdong 38-2, Myongji Univ. RM2125
Yongin, Kynggido
Korea
449-728
TEL: +82-31-330-6193
FAX: +82-31-321-6355
Email: thlee@ggbio.com alfalf@gmail.net
URL:http://www.ggbio.com

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