On Thu, Mar 26, 2009 at 5:52 PM, Zhang,Jiexin <JiexinZhang@mdanderson.org>wrote:

> Dear all,
>
> I've been having difficulty extracting gene symbol using nuID. I've tried
> human and mouse, neither of them works. For example:
>  > nuID # a nuID from mouse data
> [1] "WVEy90fXI4J7yrxXpk"
> > getSYMBOL(nuID,'lumiMouseAll.db')
> Error in lookUp(x, data, "SYMBOL") : SYMBOL is an invalid element name
>
> Would anyone give me some suggestions how to get gene symbol for Illumina
> data? Thanks a lot!
>

> get('WVEy90fXI4J7yrxXpk',lumiMouseAllSYMBOL)
[1] "Slc38a5"
> sessionInfo()
R version 2.9.0 Under development (unstable) (2008-10-13 r46706)
i386-apple-darwin9.0.0

locale:
C

attached base packages:
[1] tools     stats     graphics  grDevices utils     datasets  methods
[8] base

other attached packages:
[1] lumiMouseAll.db_1.4.0 AnnotationDbi_1.3.12  RSQLite_0.7-0
[4] DBI_0.2-4             Biobase_2.1.7

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