Hi,

I am using the current version of LIMMA (January 25, 2009) and am having the following error message from this script below:

Error Message: Error in new("AnnotatedDataFrame", data = phenotypicdata) : trying to generate an object from a virtual class ("AnnotatedDataFrame")

Problematic Script (Note this script was originally run successfully under the version of LIMMA current during the winter/spring of 2008, but is not working now):

> setClass("AnnotatedDataFrame")
[1] "AnnotatedDataFrame"
> adf<-new("AnnotatedDataFrame",data=phenotypicdata)

Here is my phenotypicdata:

      species time
c0M1        c    0
c0M2        c    0
c0M3        c    0
c0M4        c    0
s0M1        s    0
s0M2        s    0
s0M3        s    0
c24M1       c   24
c24M2       c   24
c24M3       c   24
s24M1       s   24
s24M2       s   24
s24M3       s   24
s24M4       s   24
c48M1       c   48
c48M2       c   48
c48M3       c   48
s48M1       s   48
s48M2       s   48
s48M3       s   48
s48M4       s   48
c96M1       c   96
c96M2       c   96
c96M3       c   96
s96M1       s   96
s96M2       s   96
s96M3       s   96
s96M4       s   96

Thank-you

Sally Goldes





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