On Thu, Nov 13, 2008 at 12:55 PM, Kan Huang <kh4mr@virginia.edu> wrote:

> Hi Sean,
>
> Thank you for the reply.
> The experiment type is expression and I am trying to read the data and
> normalize it.
> Could you provide more information on this please?


You may want to look at the Oligo package.

Sean



>
>
> On Thu, Nov 13, 2008 at 12:32 PM, Sean Davis <sdavis2@mail.nih.gov> wrote:
> >
> >
> > On Thu, Nov 13, 2008 at 10:48 AM, Kan Huang <kh4mr@virginia.edu> wrote:
> >>
> >> Hello everybody
> >>
> >> I was wondering if anyone has tried to use Bioconductor to analyze 385K
> >> one-color nimblegen microarray data?  Could some one point me a
> direction
> >> please?
> >
> > What type of experiment?  Expression, chip-chip, tiling expression?  And
> by
> > "analyze" you mean read in the data and normalize it?  You could look at
> the
> > Oligo package for that.
> >
> > Sean
> >
> >
> >
>

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