Hi all,

I am currently looking at the GGtools package, specifically the smlSet. I am
trying to integrate some snp data which I am using for studying CNV and the
related gene expression information and I believe this may be the class that
I I need to use. However due to the design of the snp.matrix it cannot store
these log2ratios and associated Copy number. Is there an available
package/class out there that has been created. I have spent some time
looking at the bioconductor list and can't seem to find one? Could I in
theory alter the smlSet class to stored my own version of snp.matrix
instead?

Many thanks in advance,

Nathan

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