Hi,

I have a simple and basic question:

Is it alright to think of merging two datasets (either from cDNA or
Affymetrix platform) - Final goal is to have ONE normalized dataset, where
the datasets are scaled in order to compensate the different types of
variations, if present !

Comments on strategy and packages available in Bioconductor would be of
great help.

Thanks.

Kathy


* PS: Thanks James for your earlier reply (SORRY for the delay). Here, I
have re-framed my question - I'm not sure *MergeMaid* exactly does what I'm
looking for.


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On Tue, Apr 15, 2008 at 1:19 AM, James W. MacDonald <jmacdon@med.umich.edu>
wrote:

> Hi Kathy,
>
> Assuming the chips are all the same species, I would probably use
> something like MergeMaid. There may be others -- you can check here:
>
> http://bioconductor.org/packages/2.2/DifferentialExpression.html
>
> Best,
>
> Jim
>
>

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