hi,

i really would like to query the MAPPER database from within R and was very
happy as i found the RMAPPER package. however, upon installing and loading
the package i get the message that the package is deprecated (and i also was
not able to perform queries). has the functionality of RMAPPER be included
into another package or is there any replacement for the package? what was
the reason that the package is deprecated?

i have ChIP-chip data and would like to combine the data with predicted TFBS
from e.g. the MAPPER database. is there a way to retrieve predicted TFBS for
a set of genes in R/Bioconductor?

thanks, jo

-- 
Johannes Rainer, PhD
Tyrolean Cancer Research Institute
Innrain 66, 6020 Innsbruck, Austria
Tel.: +43 512 570485 33
Email: johannes.rainer@tcri.at
           johannes.rainer@i-med.ac.at

	[[alternative HTML version deleted]]

