Dear all,

 

I am very new to illumina analysis and I get an error every time I run
this command

 

>BSData.log2.quantile = normaliseIllumina(BSData, method="quantile",
transform="log2")

Error: could not find function "normaliseIllumina"

 

Any help would be greatly appreciated 

 

Thanks heaps

Yogi

 

 

R version 2.5.1 (2007-06-27) 

i386-pc-mingw32 

 

locale:

LC_COLLATE=English_Australia.1252;LC_CTYPE=English_Australia.1252;LC_MON
ETARY=English_Australia.1252;LC_NUMERIC=C;LC_TIME=English_Australia.1252

 

attached base packages:

[1] "grid"      "tools"     "stats"     "graphics"  "grDevices" "utils" 
"datasets"  "methods"  

[9] "base"     

 

other attached packages:

   beadarray beadarraySNP  quantsmooth      lodplot     quantreg
SparseM  geneplotter      lattice 

     "1.4.0"      "1.2.0"      "1.2.0"        "1.1"       "4.08"
"0.73"     "1.14.0"    "0.15-11" 

       limma         lumi     annotate         mgcv         affy
affyio      Biobase 

    "2.10.5"      "1.2.0"     "1.14.1"     "1.3-25"     "1.14.2"
"1.4.1"     "1.14.1" 

>



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