Hi Marian,

If you type 

dir(path="/path/to/beadarray/experiment/", pattern=".tif")

do you get a list of your 8 tif files?
Also what version of beadarray are you using?

Best wishes,

Matt

-----Original Message-----
From: bioconductor-bounces@stat.math.ethz.ch on behalf of marian.thieme@arcor.de
Sent: Tue 10/16/2007 11:59 AM
To: bioconductor@stat.math.ethz.ch
Subject: [BioC] bead level data, readIllumina
 
Hello,

did trying the beadarray package and still didnt manage to read in the raw data files.

readIllumina(path="/path/to/beadarray/experiment/", textType=".csv")
it complains:
Fehler in readIllumina(path = "/path/to/beadarray/experiment/",  :
  No tiffs found

I am sure that 8 tif files are in the directory. And on the other hand I got the following working:
readIllumina(path="/path/to/beadarray/experiment/", textType=".csv", useImages = FALSE)

but I would like to let to analyse beadarray all the tiffs, Anybody know what the problem might be ?

Regards,
Marian


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