Hi all,

 

I am pretty new to illumina analysis, and I also don’t have a statistics
background. I was just wondering what the QC summary is telling me in
lumi?

The command, summary(raw.lumi, “QC”) gave me 

mean                          6.4270       6.2680       6.7480
6.5420

standard deviation            1.2520       1.3050       1.7020
1.7050

detection rate(0.01)          0.1619       0.1549       0.2262
0.2222

 

Can anyone please tell me how I should interpret these numbers? 

 

Thanks heaps

 

Yogi 

 

 



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