Hi,
   
  I'm trying to build an annotation package for yeast chips using AnnBuilder.
  I was successful, but at the end, I got an error.
  Here's my code:
   
  > library("AnnBuilder")
> read.table(file.path(.path.package("AnnBuilder"), "data", "yeastsgd"),sep = "\t", header = FALSE, as.is = TRUE)[1:5,]
          V1         V2
1 A_75_00001 S000005688
2 A_75_00002 S000005689
3 A_75_00003 S000005690
4 A_75_00004 S000005691
5 A_75_00005 S000005692
  
> myBase <- file.path(.path.package("AnnBuilder"), "data", "yeastsgd")
> myDir <- tempdir()
> yeastPkgBuilder(pkgName="yeastAgilent",pkgPath=myDir,base=myBase,version = "1.1.0",
+                 author = list(authors = "mel", maintainer ="mel.black@yahoo.fr"), fromWeb=TRUE)
  
package directory structure initialized
annotation data read complete
1:1 PROBE mappings complete
1:many PROBE mappings complete
CHRLOC complete
Error in l2e(dList, env) : require a list
Warning messages:
1: Organism Saccharomyces cerevisiae is not supported by GoldenPath (GP). in: getUCSCUrl(organism) 
2: no argument for max ; -Inf is returned in: max(i) 
   
  The following files were created in "yeastAgilent\data" folder:
  yeastAgilentALIAS.rda
  yeastAgilentCHR.rda
  yeastAgilentCHRLOC.rda
  yeastAgilentDESCRIPTION.rda
  yeastAgilentGENENAME.rda
  yeastAgilentORF.rda
  yeastAgilentPMID.rda
   
  Hope someone could explain me where this error comes from, and how to fix it.
   
  > sessionInfo()
R version 2.5.1 (2007-06-27) 
i386-pc-mingw32 
  locale:
LC_COLLATE=French_France.1252;LC_CTYPE=French_France.1252;LC_MONETARY=French_France.1252;LC_NUMERIC=C;LC_TIME=French_France.1252
  attached base packages:
[1] "tools"     "stats"     "graphics"  "grDevices" "utils"     "datasets"  "methods"   "base"     
  other attached packages:
        GO AnnBuilder   annotate        XML    Biobase 
  "1.16.0"   "1.14.0"   "1.14.1"    "1.9-0"   "1.14.1" 
   
   
  Mel.

       
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