Hi,
I'm trying to use the affyQCReport package to assess the quality of some
Affymetrix arrays, however; I'm apparently using an unsupported CDF library
file.  I've tried to create a new cdf environment with the makecdfenv
package with no success.  The code snippets for both attempts are as below.
Can anyone offer any insights into either of these problems?

Thanks in advance.
Andy


> affyBatch <- ReadAffy()
> QCReport(affyBatch,file="AffyQC.pdf")
Error in getCdfInfo(object) : Could not obtain CDF environment, problems
encountered:
Specified environment does not contain DogSty06m520431
Library - package dogsty06m520431cdf not installed
Data for package affy did not contain dogsty06m520431cdf
Bioconductor - dogsty06m520431cdf not available



make.cdf.package("DogSty06m520431.cdf", species = "Dog")
Error in make.cdf.env(filename, cdf.path = cdf.path, compress = compress,  :

        makecdfenv does not currently know how to handle cdf files of this
type (genotyping).

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