Hi

I have looked in the archives and found out that I can use makePDpackage to make platform design packages for my GeneChip S. Pombe Tiling 1.0FR Array, but I have gotten some problems and questions. 

My question is: What can I do with my data after I have made this package?

My problem: When I try to run the command I get the following error.


> makePDpackage("Sp20b_M_v04.bpmap", file1 = "Sp20b_M_v04.cif", manufacturer = "affymetrix",type="tiling")
affymetrix tiling 
The package will be called pd.sp20b.m.v04 
Error in makeBPMAPenv(designFile, file1, genomebuild = genomebuild) : 
        SET_VECTOR_ELT() can only be applied to a 'list', not a 'NULL'

My session info is as follows:
> sessionInfo()
R version 2.5.0 (2007-04-23) 
i386-pc-mingw32 

locale:
LC_COLLATE=Norwegian (Bokmål)_Norway.1252;LC_CTYPE=Norwegian (Bokmål)_Norway.1252;LC_MONETARY=Norwegian (Bokmål)_Norway.1252;LC_NUMERIC=C;LC_TIME=Norwegian (Bokmål)_Norway.1252

attached base packages:
 [1] "grid"      "splines"   "tools"     "stats"     "graphics"  "grDevices" "utils"     "datasets"  "methods"   "base"     

other attached packages:
   makePlatformDesign                 oligo BufferedMatrixMethods        BufferedMatrix               RSQLite 
              "1.0.0"             "1.0.2-3"               "1.0.0"               "1.0.0"               "0.5-4" 
                  DBI           tilingArray                pixmap                   vsn                 limma 
              "0.2-3"              "1.14.0"               "0.4-7"               "2.2.0"              "2.10.0" 
          strucchange              sandwich                   zoo          affyQCReport           geneplotter 
              "1.3-2"               "2.0-2"               "1.3-1"              "1.14.0"              "1.14.0" 
              lattice              annotate          RColorBrewer               affyPLM                 gcrma 
             "0.15-8"              "1.14.1"               "0.2-3"              "1.12.0"               "2.8.0" 
          matchprobes              affydata                xtable            simpleaffy            genefilter 
              "1.8.1"              "1.11.2"               "1.4-6"             "2.10.11"              "1.14.1" 
             survival                  affy                affyio               Biobase 
               "2.31"              "1.14.0"               "1.4.0"              "1.14.0"





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