Hello everyone,

 

I'm new to bioconductor and microarray in general, so please excuse my
ignorance.

 

I am trying to analyze my microarray experiment using limma.  We have
used Agilent to spot our arrays, and we have duplicate spots.  However,
these spots are placed randomly over the entire chip.  How do I let
limma know that there are duplicate spots with a random distribution.  I
can't seem to find anything that explains this.

 

Thanks in advance,

 

Wyatt

 

K. Wyatt McMahon, Ph.D.

Postdoctoral Research Associate - Functional Genomics Center and
Services Facility

Texas Tech University 

Department of Plant and Soil Sciences

Campus Box 42122

79409

806-742-5073 ext. 263

 


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