I am using limma to analyze affy data. i made some contrasts and using
classifyTestsF(object,p.value=0.01) I get the following results:
   E.OvsC.O	 I.OvsC.O 	IM.OvsC.O 	E.TvsC.T
I.TvsC.T 	IM.TvsC.T 	C.TvsC.O 	E.TvsE.O
IM.TvsIM.O 	M.TvsM.O
-1       34     	 229       	798      		369
469       	430      		 26      		146
1938      	820
0     54582   	 54142    	 53302    	54105
53955     	53971    	54611   		 54417
50907    	53367
1        59      	304       	575      		201
251       	274       	38     		 112       	1830
488


Now I wanna make a list of the probests which change in every contrast
(increases and decreases separately). how do I make a list of these
probesets. Any help would be appreciated and thanks in advance.
Som.

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