Dear Lana,

You may want to have also a look at the following papers:

http://www.biomedcentral.com/1471-2164/8/17
http://www.biomedcentral.com/1471-2164/7/266
http://www.biomedcentral.com/1471-2105/7/388

Best regards,
Martin






"Gordon K Smyth" <smyth@wehi.EDU.AU>
Sent by: bioconductor-bounces@stat.math.ethz.ch
24.01.2007 22:19
Please respond to smyth

 
        To:     "Lana Schaffer" <schaffer@scripps.edu>
        cc:     bioconductor@stat.math.ethz.ch, (bcc: Martin Schumacher/PH/Novartis)
        Subject:        [BioC]  Normallization for focused chips
        Category: 



Dear Lana,

See http://genomebiology.com/2007/8/1/R2

Best wishes
Gordon

> Date: Tue, 23 Jan 2007 11:35:43 -0800
> From: "Lana Schaffer" <schaffer@scripps.edu>
> Subject: [BioC] Normallization for focused chips
> To: <bioconductor@stat.math.ethz.ch>
> Message-ID: <003501c73f25$ac9eda20$54508389@menton>
> Content-Type: text/plain
>
> Hi,
> What would you recommend for the best normalization procedure
> for a focused chip for which the number of genes changing is
> ~300 from 1000 genes?
>
> Lana Schaffer
> Biostatistics/Informatics
> The Scripps Research Institute
> DNA Array Core Facility
> La Jolla, CA 92037
> (858) 784-2263
> (858) 784-2994
> schaffer@scripps.edu

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