Hi,

I believe that scale adjustment between arrays must be done with caution. If
the array were produce from different individuals you can remove biological
variability between the individuals and, to me, this is a very interesting
(and important) information.

Best



On 1/24/07, Marcelo Laia <marcelolaia@gmail.com> wrote:
>
> Hi,
>
> I did a
>
> normalizeWithinArrays(RG,method="printtiploess")
>
> and get this boxplot
>
> http://200.145.102.65:9102/normalized.data.png
>
> Is needed to do a
>
> normalizeBetweenArrays(MA.2,method="scale")
>
> ???
>
> What you suggest me?
>
> I am not sure if a little difference  between box is big or not.
>
> Thank you
>
> --
> Marcelo Luiz de Laia
> Ph.D Candidate
> São Paulo State University (http://www.unesp.br/eng/)
> School of Agricultural and Veterinary Sciences
> Department of  Technology
> Via de Acesso Prof. Paulo Donato Castellane s/n
> 14884-900   Jaboticabal - SP - Brazil
> Phone: +55-016-3209-2675
> Cell: +55-016-97098526
>
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