Hi All,

 

I have a targets file containing imagene generated Cy3 and Cy3 files to
be input to Limma. It is a 2x2 unconnected factorial design and so I am
trying to specify the correct "design" matrix for this type of data. I
have scanned the entire manual, but did not find any help doing this
(the example under 8.7 specifies design files for affy data).

 

If anyone has any tips/pointers on specifying design files and how to
convert the targets frame to be channel oriented using targetsA2C (for
imagene data), please HELP !

 

Thanks

Parthav

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It is worse to be insincere than to be in error! 

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