hi seth, hi wolfgang,

i also think that that's a problem if the new gcc with the BGL, on the
release notes of the gcc (http://gcc.gnu.org/gcc-4.1/changes.html) there is
in the section c++ a point concerning templates which probably causes this
problem (as far as i understand).
best, jo

On 5/19/06, Wolfgang Huber <huber@ebi.ac.uk> wrote:
>
> Hi Seth,
>
> > Thanks for sending an update.  Glad to hear that you were able to get
> > RBGL working on your system.
> >
> > Just to clarify a bit on what I think the issues are:
> >
> > RBGL includes prepackaged sources from the Boost Graph Library
> > (heavily templated C++).  It's this library code that fails to compile
> > on the newer gcc's.  This isn't really a Bioc issue as much as a Boost
> > issue and ideally, the Boost project will fix their code.
>
> I have had the same problem with (R)BGL and gcc 4.1, just wanted to
> point out that based on what we know (please correct if I'm wrong) the
> problem is in the interaction between gcc 4.1 and the Boost Graph
> Library, and it seems too harsh to say that the fault or the need for a
> fix is necessarily on BGL's side.
>
> Best
> W.
>
> --------------------------------------------------------------
> Wolfgang Huber   EBI/EMBL   Cambridge UK  Tel. +44 1223 494642
>
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-- 
Johannes Rainer, Msc
Tyrolean Cancer Research Institute
Innrain 66, 6020 Innsbruck, Austria
Tel.: +43 512 570485 15
Email: johannes.rainer@tcri.at
          johannes.rainer@tugraz.at

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