Thank you everyone for your help,

 

I want to clarify one point, is the MAlist object the data file I load in? I
came to the conclusion about special; requirement because of a duplicate
correlation error I was getting with LimmaGUI, Following people's help I
guess I was getting the error in LimmaGUI due to the control spots. If I
pull them out of the results file then I should be okay. I take it they
should also come out of the gal file as well?

 

Thank you all for your help,

 

Liz

 

 


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