Interesting -- does anyone know if you need to "compensate" for 4-color? (I 
know that you _sometimes_ have to for 4-color flow cytometry)

best,
-tony

On 9/9/05, hdvi <hdvi@well.ox.ac.uk> wrote:
> 
> Hi
> 
> We're currently beginning to use microarrays with 4 colors, and I was
> wondering whether anyone out there had any experience analyzing those
> using Bioconductor?
> 
> I've previously used limma for normal microarray analysis and also for
> arrays with just 1 dye. I've been quite happy with that, but it appears
> that if I want to continue with that I have to e.g. split the data from
> each array into two 'pseudo-arrays', which isn't exactly optimal. I
> won't be doing expression analysis, but I'll need functions for
> normalizing the data etc. Has anyone tried something similar?
> 
> Thanks in advance
> \Heidi
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor@stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> 



-- 
best,
-tony

blindglobe@gmail.com
Muttenz, Switzerland.
"Commit early,commit often, and commit in a repository from which we can 
easily
roll-back your mistakes" (AJR, 4Jan05).

	[[alternative HTML version deleted]]

